Are you trying to mate up with the existing holes in the hull? If so, I wouldn't even think about trying to do that. Fill in the old holes with RTV or resin (if you want). Pick a starting point for the rub rail, and just drill the new rub rail on 6" centers, offsetting them about 3" from the existing holes in the hull. Do this before you start attaching the rub rail. Rivet (or screw) the new rub rail as you wrap it around, drilling each new (hull) hole as you go (you did drill the rub rail first, right?)
Make sure that you have a couple of feet of material for "leverage" around those sharp corners at the sponson tips (or any sharp corner). Once you get the rail moving around a sharp bend, you don't want to stop, because the material will be work-hardened, and it will very difficult to get it bending again at that same location. That's the worst part of the whole process - wrapping the corners like a madman.
Good luck!