Suction Housing
The AT is hands down a much more structural part. Just about every feature of the AT is thicker, particularly the flanges. Of the Berkeley suction housings, the latter housing with the cursive logo is the strongest.
You will need to determine which AT suction you have, there are several possibilities. Which hand hole cover does it have, the early or the late 3-bolt or the flat round? Next; which shaft, bearing, and seals does it have?
Some AT suction housings, like their intakes, have an unusual bump (picture 1) in the roof, just under the thrust bearing. Again, this bump disturbs the water flow.
The short side radius along the floor of some AT housings, including the Dominator have an unusual contour present (picture 2). The Berkeley suction housing, with its smooth contour, is superior from a flow standpoint.
The diameter of the flanges are different also:
Berkeley, early and late - 11-3/8"
AT and Dominator - 11-5/8
The difference in diameter will pose a problem with the transom adapter. More on this later.
The Challenge
Should you choose to accept it: First, bolt the stripped AT suction housing to the Berkeley intake, currently installed in the boat, using every last bolt. Look all around the inside to see if it fits nicely. You definitely do not want any overhang of the short side radius restricting flow into the lower half of the impeller.
Next, if there is misalignment, what will it take to align it? If substantial movement is required, the suction should be pinned to maintain alignment with the intake (pictures 3 & 4)